Challenges of an Open Access Screening Platform in Academia

Wednesday, 30 May 2012 at 11:45

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The lecture will describe the common workflow at the Screening Unit and the integration of the compound management system at our platform. It will give insights which show differences between an academic platform and an industrial set up exist. Additionally, our approach to collect compounds from academia will be discussed.

Moving Laboratory Automation Forward

Thursday, 31 May 2012 at 09:30

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This presentation will look at what it is going to take to turn lab automation into the dynamic, productive field it should be. We’ll look at education requirements, skills need as we move toward scientific manufacturing, integrated systems and the development of Laboratory Automation Engineering.

Too Big for a Small World? Intact Protein Analysis by Nano-UHPLC-MS/MS

Thursday, 31 May 2012 at 14:15

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Investigating intact protein analysis by LC-MS/MS, thought the use of a sensitive and robust nano-UHPLC-MS/MS method. Quantification of intact, prohibited, IGF-I in sport using very small volumes of human serum is demonstrated.

Automation of Cell Based Assays in Drug Discovery

Thursday, 31 May 2012 at 11:15

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Rapid and Sensitive Identification of Bacillus and Clostridium Spore Coat Proteins

Wednesday, 30 May 2012 at 16:30

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In this presentation we will highlight the principles of our protein isolation and identification methods to detect covalently bound proteins that are candidates for biomarkers and vaccines at the outer spore coat layer of endospores from Bacillus subtilis and the pathogenic micro-organisms Bacillus cereus and Clostridium difficile.

Homeostasis? Variability of VOC Profiles in Humans and the Implications for Marker Discovery in the Volatile Domain

Wednesday, 30 May 2012 at 17:00

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Any individual’s metabolism changes significantly throughout the course of a typical day. How does hunger, stress and digestion affect VOC profiles in human? This presentation describes the research undertaken to characterise such complexity, in the VOC profiles of saliva, skin and breath.

2D Versus 3D Quantitative Imaging Assays in vitro Applied to Metastatic Cells

Thursday, 31 May 2012 at 15:45

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3D Tumor Spheroids for Drug Discovery in Oncology

Thursday, 31 May 2012 at 14:45

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We here present our current work on establishment and evaluation of High Content Analysis-based assays on 3D tumor spheroids for drug discovery in oncology.

3D Chemical Compounds Screening Assay to Uncover Signaling Pathways Involved in CAFs-Remodeling Tumor Microenvironment

Thursday, 31 May 2012 at 14:15

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Drug-Induced Hepatotoxicity Prediction using Three-Dimensional Culture Models in High Content Screening Context

Thursday, 31 May 2012 at 16:15

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This oral will present a practical combination of 3D culture system associated with a dedicated 3D image analysis for hepatotoxicity assessment in a high content screening context.

Close of Conference

Thursday, 31 May 2012 at 16:45

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High Content siRNA and RNAi Screening

Wednesday, 30 May 2012 at 09:25

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Running a Biobank – Detecting Current Legal Trends, Avoiding Typical Legal Pitfalls

Wednesday, 30 May 2012 at 09:30

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The presentation covers legal questions from sampling, via scientific and commercial use of the samples and public advertising the services of a biobank. The presentation will therefore also explain how to avoid typical legal pitfalls biobanks face.

Coffee Break and Networking in the Exhibition Hall

Thursday, 31 May 2012 at 15:15

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Lunch and Networking in the Exhibition Hall

Thursday, 31 May 2012 at 12:30

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Poster Viewing Session

Thursday, 31 May 2012 at 13:30

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High Precision Flow Control with Pressure Source Allowing Flow Control for Long Period Experiments: The MAESFLO Device

Thursday, 31 May 2012 at 14:45

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The MAESFLO device is a unique tool to study and control flows in micro-devices. Controlling and monitoring with a high precision and short response time, it is possible to get more precise and reach information on the system.

Large-scale Droplet Microfluidics: From Digital Biology to Targeted Therapy

Thursday, 31 May 2012 at 09:30

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While droplet and bubble microfluidics promise new platforms for diagnostics and therapeutics, challenges remain in scaling up to large numbers of these “micro-vesicles” as reactors and carriers for biotechnology and biomedicine. Scaled-up microfluidic approaches are required and will be introduced.

Challenges in Automating Flow Control in Micro and Nanofluidics: Application to Cell Sorting

Thursday, 31 May 2012 at 14:15

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The talk will discuss the main challenges raised by flow control on the route towards fully integrated “sample to result” high throughput microfluidic instruments. The advantages and disadvantages of the main methods available will be discussed, and a few examples of biological applications will be reviewed.

Maximizing the Impact of a Compound Collection

Wednesday, 30 May 2012 at 09:00

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In 2009, Pfizer launched an initiative to rationalize the screening collection. This talk will describe its implementation and other efforts to make the Pfizer collection more accessible to the right targets.

How to Access Screening Libraries and HTS Outside the Pharma World

Wednesday, 30 May 2012 at 14:45

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What are the right strategies to build up compound collections outside the safe-guarded Pharma collections to generate “starting points” and “tool compounds”. Besides the scale, design, quality of the collection the uniqueness, the operation, the follow up, IP and the budgets have to be addressed.

Efficient Syntheses of Natural Products and their Analogues using Laboratory Automation Technology

Thursday, 31 May 2012 at 16:15

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This presentation includes the efficient synthesis of taxol and 9-membered masked enediyne, aided by automated synthesizers and the continuous-flow synthesis of vitamin D3 from provitamin D3 aided by micro-flow reactors.

Screening Library Management and Quality Maintenance

Wednesday, 30 May 2012 at 08:55

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Lunch & Networking in Exhibition Hall

Wednesday, 30 May 2012 at 12:30

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Drinks Reception

Wednesday, 30 May 2012 at 17:00

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Lunch & Networking in Exhibition Hall

Thursday, 31 May 2012 at 12:15

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Poster Viewing Session

Thursday, 31 May 2012 at 13:30

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Close of Conference, Coffee Break and Networking in the Exhibition Hall

Thursday, 31 May 2012 at 15:15

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The Importance of Liquid Handling Details and their Impact on your Assays

Wednesday, 30 May 2012 at 11:15

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Automated liquid handlers can be powerful tools when their performance is measured and controlled. This presentation focuses on understanding the behavior of automated liquid handling systems and highlights the need to ensure quality in assays performed with such systems.

Automated Droplet Microfluidics for Biochemistry and Microbiology

Thursday, 31 May 2012 at 14:45

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Automated droplet microfluidics offers throughput and multiplexing in conjunction with miniaturization of the volumes of reaction or incubation compartments. A common platform for microfluidic modules allow to construct systems presenting versatile functionality for applications ranging from diagnostics to biotechnology.

Living Droplets: Cell-based Assays on a Miniaturized Scale

Thursday, 31 May 2012 at 11:15

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Droplet-based microfluidic systems allow the analysis of cells at very high throughput (up to 106 samples per hour), optionally even on the single-cell level. We present here a fully integrated platform and its application in functional single-cell hybridoma screening.

Depletion zone Isotachophoresis: A New Tool for Next-gen Life Sciences

Wednesday, 30 May 2012 at 11:45

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Using a combination of microfluidics and nanofluidics our group has recently developed an ultra-small device unleashing the full power of isotachophoresis. The use of 'dzITP' will for the first time allow on-chip electrokinetic separations to be integrated into (V)LSI formats for massive parallel next-gen life science applications where high-quality separations are needed e.g. next-gen metabolomics.

Droplet-based Microfluidics for the High Sensitivity Detection of Cancer Biomarkers in Biological Samples

Thursday, 31 May 2012 at 10:00

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We will present how by combining droplet-based microfluidics and advances in molecular diagnostic, we developed an original method allowing to perform millions of single molecule PCR in parallel to detect and quantify biomarkers in biological samples.

Chemicals Screening in Droplet-based Microfluidics

Thursday, 31 May 2012 at 11:45

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Using droplet-based microfluidics, monodisperse droplets of water in oil emulsions are used as microreactors for biotechnological applications. Here we will focus on the manipulation of chemicals in this format, starting from the basics of compounds storage in emulsions towards drug screening applications.

Microfluidic Apps for Off-the-shelf Instruments

Wednesday, 30 May 2012 at 17:00

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This presentation will summarize the advantages of Microfluidic Apps: Disposable microfluidic chips being processed on off-the-shelf instruments. Examples include a microfluidic disk for automated DNA purification on a standard laboratory centrifuge and for automated genotyping on a standard thermocycler.

Human Research Biobanks in Europe: Ethical and Regulatory Aspects

Wednesday, 30 May 2012 at 10:00

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This talk aims to present ethical, legal and regulatory aspects associated with human research biobanks in Europe. It focuses on key ethical aspects that distinguish adult from pediatric biobanks.

Tumour Biobank for Advancing Translational Research in Oncology

Thursday, 31 May 2012 at 11:15

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Prevention, treatment and care of cancer patients largely depend upon improvements in scientific research. By creating a virtual inter-institutional tumour biobank, translational research will be promoted and a network created for future academic, medical and/or industrial collaborations.

Biobanking : Economics and Impact

Wednesday, 30 May 2012 at 16:00

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While it is recognized that high quality biospecimens are critical in every aspect of today's medicine, the true cost and economic impact of biobanking has been poorly understood and better definition is needed.  Current and future initiatives to address this will be discussed and evaluated.  Topics will include: the total life cost of ownership, the costs associated with implementing best practices, how can the value of specimens and data be determined, and how can the economic benefits of biobanking be quantified.

An Automatic Millifluidic Instrument for Marker-independent Isolation of Circulating Tumor Cells (CTC)

Thursday, 31 May 2012 at 16:15

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There exists an urgent need for instruments that can provide generalized isolation of circulating tumor cells for the clinical laboratory, not limited by the existing single marker, affinity-based, technologies. We present the status of development of such an instrument.

Use of ICT Tools to Monitor and Trace Life Cycle of a Biosample: The Experience of the BioBIM (Interinstitutional Multidisciplinary BioBank)

Thursday, 31 May 2012 at 11:45

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The use of ICT tools ie, RFID technology, allows to collect detailed data concerning several manual processes and to fully document the whole life cycle of samples stored in a biobank.

Tissue Based Diagnostics for Predicting Drug Response: Challenges and Opportunities

Wednesday, 30 May 2012 at 11:45

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Identification of cancer pathways which drive cell proliferation and metastases is becoming an important approach for predicting drug response in individual patients. Reliable quantification of (phospho-) proteins in tumor tissues requires collection procedures which follow scientific standards of high-quality biobanks as established by Indivumed.

Biobanking in a Private Research Institute: Practical Approaches and Challenges

Wednesday, 30 May 2012 at 14:15

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Biobanking is an organized industry that provides biospecimens for research. Private Biobanks collect and bank a wide variety of specimens for internal and external use.  The practical approaches we have instituted to address “demand” and “supply” challenges will be discussed.

Blurring Boundaries between Research and Care in Biobanking: Exploring Tensions in Governance

Wednesday, 30 May 2012 at 11:15

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Biobanks are confronted with multiple, diverging and changing norms related to research versus medicine. These entail different models of donor recruitment, and the conflation of research infrastructures as public versus private goods. We review the implications of these tensions for achieving 'interoperable' biobank governance.

The Utility of Enabling Chemistry Technology for the Acceleration of Drug Discovery

Thursday, 31 May 2012 at 10:00

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The talk will highlight compound library production using a fully automated segmented flow reactor. In addition, automated systems for synthesis with photochemistry and hydrogenation will be highlighted.

Next Generation Sequencing for Defence Applications

Thursday, 31 May 2012 at 09:00

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The Defence Science Technology Laboratory (DSTL) is an integral part of the UK Ministry of Defence. Since 2009 DSTL has been actively evaluating next generation sequencing platforms to provide the UK MoD with a high confidence biological agent identification capability.

The Ion Torrent Personal Genome Machine at Kingston University, London

Wednesday, 30 May 2012 at 11:45

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The Ion Torrent Personal Genome Machine is an affordable platform, which has enabled researchers and educators at Kingston University to access cutting edge NGS technology.

Can we Exploit the Power of NGS to Move Towards Personalized Medicine?

Wednesday, 30 May 2012 at 10:00

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NGS is becoming common place in a clinical environment. Generating data, however, is only the tip of the iceberg. A talk on  successes, failures and challenges ahead, if we want to turn NGS into the holy grail of "personalized medicine''.

Integration of Next Gen Sequencing in a Genomics Core

Wednesday, 30 May 2012 at 16:00

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The presentation will address the revolution introduced by NGS technologies, its complementarities to other genomics technologies, and some of the consequences for Core labs, such as the need to implement LIMS and robotics.

Technologies Development for High-throughput Immune Sequencing

Wednesday, 30 May 2012 at 14:45

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We discuss the technology of Immune Sequencing and applications as well as future developments.

The Power of Liquids - Separations using Liquid-liquid Technologies

Wednesday, 30 May 2012 at 11:45

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The presentation will describe some of the unique advantages of liquid-liquid technologies, such as the ability to accept particulates or to flow continuously, giving case examples as necessary.

Integration of Parallel Synthesis, Compound Management and Screening in Support to the Italian National Chemical Collection Center

Wednesday, 30 May 2012 at 11:15

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The interconnection between library synthesis, quality control, assay design and target focus is commonly under-evaluated in HTS. This presentation will show how a flexible "compound to assay" approach can drive the success of HTS in a public-private enterprise.

Microfluidic Market: Where Can We Expect Growth?

Wednesday, 30 May 2012 at 16:30

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Over the last 3 years, big diagnostic companies and other investors have put more money into the acquisition of microfluidic technologies than over the last ten years. However, not all the applications are poised for high growth.

How to Improve Interoperability of Biobanks: European and International Initiatives

Wednesday, 30 May 2012 at 14:45

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The OECD Global Biological Resource Centres Network (GBRCN) should facilitate research requiring access to high quality biological samples and biomolecular resources.

A Synergistic Approach to Regenerative Medicine through Cellular Therapy and Tissue Engineering

Thursday, 31 May 2012 at 15:45

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The presenter will outline structure for biobanking of adult stem cells, cord blood stem cells and tissues.

Research Data Management in Academic Life Science Institutes – ELN and Image Management at VIB

Thursday, 31 May 2012 at 11:45

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VIB’s software requirements and change management strategy to roll out an electronic lab notebook system to the institute will be presented, as well as the integration path with an Image Management solution based on the OMERO system.

Latest Laboratory Weather Forecast: More Clouds on the Horizon

Thursday, 31 May 2012 at 09:30

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Adopting new technologies only makes sense if it results in better and faster scientific research. IT buzz words are often overwhelming the scientists without translating these great technologies innovations into viable scientific solutions. This presentation will highlight the benefits of the different cloud variances available for pharmaceutical research.

Overcoming the Challenges Facing Laboratory Integration

Wednesday, 30 May 2012 at 09:30

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Year by year, the convergence of science and technology brings the prospect of a fully integrated, ‘paperless’ laboratory closer and closer.  But a number of challenges need to be overcome in order to move to a new paradigm.

UNICORE as a Tool for Processing the Data from GS FLX

Wednesday, 30 May 2012 at 14:15

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This talk is about processing data from the GS FLX Instrument (Roche diagnostics) using the UNICORE workflow system.

MAPS - A Specialized LIMS for R&D Laboratories

Thursday, 31 May 2012 at 14:15

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MAPS (Material Administration and Preparation System) is a flexible, adaptable, web-based LIMS that can be adjusted to changing needs of laboratories. It is specially tailored at small-to-medium R&D laboratories. Its most important features are an innovative, flexible data model and a workflow engine with configurable protocols.

BPM Technology as a Mechanism for Improvement of Automation Level in Life Sciences

Wednesday, 30 May 2012 at 11:15

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This presentation focuses on the application and the evaluation of business process management (BPM) technologies for high level workflow automation in laboratories. Examples show the potential of this new approach for the flexible sub-process integration and first experiences.

Lunch & Networking in Exhibition Hall

Wednesday, 30 May 2012 at 12:30

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Close of Conference

Thursday, 31 May 2012 at 16:45

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Session: Data Analysis and Bioinformatics

Wednesday, 30 May 2012 at 08:55

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Session: Sequencing Platforms and Methods

Wednesday, 30 May 2012 at 11:40

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Lunch and Networking in Exhibition Hall

Wednesday, 30 May 2012 at 12:30

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Poster Viewing Session

Wednesday, 30 May 2012 at 13:30

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Ion Torrent PGM Sequencer in Genomic and Transcriptomic Analysis

Wednesday, 30 May 2012 at 14:15

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The Ion Torrent PGM semiconductor-based platform is the first commercially available non-optical sequencing technology. Some of the sequencing applications in genome and transcriptome analysis are presented.

Commercial Biobanking in an Academic Setting: Exploring the Scientific and Fiscal Boundaries of Biosample Resources

Wednesday, 30 May 2012 at 16:30

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Defining the value of biomaterials for research and clinical applications. How to develop a self-sustaining biorepository to support the local and global community.

Biobanking Rare Disease, the Eurobiobank-Telethon Experience

Thursday, 31 May 2012 at 09:00

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To capture the value of rare disease material collection, the accomplishment of Eurobiobank and Telethon Network of genetic biobank will be presented as well as the catalogue used for rare diseases collection.

Drinks Reception

Wednesday, 30 May 2012 at 17:30

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Session: Banking of Various Biological Samples: What is the value of Biobanking and Biorepositories?

Wednesday, 30 May 2012 at 14:40

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Molecular Tools to get the Most Out of Biobank Samples

Thursday, 31 May 2012 at 10:00

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Increasingly, large-scale analyses of biobank samples are undertaken at levels of DNA and RNA, but opportunities for extensive protein analyses have lagged behind. The proximity ligation technology allows high-performance analyses of plasma samples from patients and controls with readout via next generation sequencing.

Session: Banking of Various Biological Samples: Sample Classes for Biobanking and Storage

Thursday, 31 May 2012 at 09:55

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Lunch and Networking in Exhibition Hall

Thursday, 31 May 2012 at 12:30

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Poster Viewing Session

Thursday, 31 May 2012 at 13:30

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Session: Cord Blood Banking: Logistic Challenges in the Space as the Field Expands

Thursday, 31 May 2012 at 15:40

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Following Nature’s Lead – Developing Next Generation Biostabilization Reagents

Thursday, 31 May 2012 at 14:15

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This talk will provide details of work at Biomatrica in the invention and development of biostabilization technology which protects and preserves all forms of biologicals under ambient temperature, allowing not only for asset protection, but also significant impact on the future cost of patient sample collection, shipping and storage in personalized health care management.

Coffee Break and Networking in Exhibition Hall

Thursday, 31 May 2012 at 15:15

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Close of Conference

Thursday, 31 May 2012 at 16:45

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Poster Viewing Session

Wednesday, 30 May 2012 at 13:30

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Drinks Reception

Wednesday, 30 May 2012 at 17:30

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Next generation High Content Screening – Big-Data Challenge

Wednesday, 30 May 2012 at 14:15

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SiRNA Sequence Model: ReDesign Algorithm Based on Available Genome Wide Libraries and Screens

Wednesday, 30 May 2012 at 10:00

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Because not all siRNAs that are developed to a given target mRNA are equally effective, design tools have been developed based on experimental data to increase the knock-down efficiency of siRNAs. On this talk bioinformatics approach to validate design of siRNA libraries will be presented. New methods for better siRNA sequences will be proposed.

High Content siRNA Screening for Modulatros of Receptor Expression/Compartmentalization and Cytoskeletal Organization

Wednesday, 30 May 2012 at 09:30

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High Content Screening (HCS) has been developed for RNAi-loss of function assays to search for modulators of caveolin-1  (Cav1) expression and compartmentalization and for Rab8-mediated cytoskeletal phenotypes using confocal microscopy imaging of tumor cell lines and multiparametric image analysis. 

Identifying Factors Linked to Self-Renewal and Differentiation of Primary Muscle Stem Cells: An Integrative Approach of Mass Spectrometry and High-Throughput RNAi Screening

Wednesday, 30 May 2012 at 11:45

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We have performed a high-content lentiviral RNAi screen on purified primary muscle stem cells and have identified novel regulators of their self-renewal and differentiation.

Novel Research using HCS, HTS and Cell Based Assays

Wednesday, 30 May 2012 at 14:40

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Identification of Highly Potent, Short and Stable Chemerin Analogs using High-Content Analysis and Other Cell-Based Assays

Wednesday, 30 May 2012 at 16:00

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CMKLR1 is a GPCR overexpressed in squamous cell carcinomas of the esophagus. We have advanced the wild-type C-terminal nonamer peptide of its ligand chemerin into highly stabilized analogues that retain both high affinity and receptor activation. Coupling optimized peptide variants to fluorescent dyes and chelators via different linkers enabled us to generate contrast for tumor imaging.

Actin' Out, Development of a High Content Screen Protocol for Investigation of the Interplay Between Epithelial Junctions and the Actin Cytoskeleton

Wednesday, 30 May 2012 at 11:15

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siRNA screen in primary human keratinocytes to identify novel candidate proteins involved in wound healing.

High Throughput-High Content Phenotypic Drug Screening: Using the Power of Flow Cytometry

Wednesday, 30 May 2012 at 17:00

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Multiplexed technologies are increasingly being incorporated into discovery programs evaluating the efficacy and toxicity of compounds. We will discuss  a novel system for performing multiplex phenotypic screening assays on suspensions of cells or beads.

Advances in Image Based Screening

Thursday, 31 May 2012 at 09:25

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Digital Holographic Microscopy (DHM): A Label Free Technology for Image-Based Screening Applications

Thursday, 31 May 2012 at 11:15

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In order to validate the use of this non invasive interferometric microscopy for monitoring morphological cell changes, we initially focus on cell viability screening assays by comparing the experimental outputs of DHM and standard fluorescence microscopy methods.

Advances In and Use of 3-D Screening Assays

Thursday, 31 May 2012 at 11:40

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Novel, Simple Technology for Creating Physiologically Relevant 3-D Tissue Models

Thursday, 31 May 2012 at 11:45

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RAFT is a novel technology that enables collagen based cell cultures to be made simply, rapidly and consistently. The realistic environment enables co-cultures to be created and more complex cell behaviour to be studied.

Session: Banking of Various Biological Samples: What is the value of Biobanking and Biorepositories? cont'd

Thursday, 31 May 2012 at 08:55

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Droplet Microfluidics 1

Thursday, 31 May 2012 at 09:25

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Nanofluidics

Wednesday, 30 May 2012 at 08:55

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Magnetic Particle-based Microfluidic Systems and Nanofluidics for Analytical Applications

Wednesday, 30 May 2012 at 09:00

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We describe microfluidic systems that use magnetic manipulation of magnetic microparticles for the realization of immunoassays, and nanofluidic devices for biological sample concentration.

Micro-fluidic Cytometry

Wednesday, 30 May 2012 at 14:15

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Microfluidic systems have the potential to deliver fast, inexpensive and simple methods of cell analysis with applications in clinical practice, remote diagnostics at home or in resource poor (developing world) settings, and for environmental applications such as water testing. The technology is particularly attractive for point of care and patient self-testing. This talk will describe developments in micro-fluidic cytometry systems and outline some application scenarios ranging from a Critical Blood Count to in-situ systems for analysis of phytoplankton.

Nanofluidics: Some New Fundamental Phenomena; Microfluidics: Efficient Green Energy Generation

Wednesday, 30 May 2012 at 09:30

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The narrow confinement of nanopores and nanochannels leads to surprising transport processes which have important consequences for e.g. nanopore DNA sequencing and isotachophoresis. Furthermore, the application of two-phase flow can greatly enhance energy generation efficiency in streaming-potential based systems.

Droplet Microfluidics for High Throughput Biological Analysis

Thursday, 31 May 2012 at 16:15

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The Nanobiotechnology group is focusing on interdisciplinary research combining nanotechnology and microfluidics with various biotechnology and medical applications such as, for example, microwell plates and droplet microfluidics. 

The Impact of Rapid, Automated Analysis of HTS Library Sample Quality

Wednesday, 30 May 2012 at 10:00

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Compound managers are challenged with the timely delivery of cherry-picked samples to their customers, while assuring that the delivered samples are of high quality. Additional effort is associated with monitoring the quality of samples contained in multiple copies of screening libraries themselves. This presentation will focus on the impact of the “Plate Auditor” platform on Scripps’ compound management and HTS operations. The Plate Auditor simultaneously measures sample volume, color and the presence of precipitate in plate-based samples. The impact of this instrument on Scripps’ QA/QC of cherry-picked samples will be presented, as well as the results of a comprehensive audit of ~1 million samples from Scripps’ screening libraries.

Sample Management and HTS: Convergent Platforms and Universal Solutions to Simplify the Integration Challenge

Thursday, 31 May 2012 at 14:15

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New developments in standardized systems and modular, commercial off the shelf solutions, to simplify the software integration challenge within Sample Management and HTS.

ESPRIT: High Throughput Screening for Soluble Expression Constructs of Difficult-to-express Proteins.

Thursday, 31 May 2012 at 11:45

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The ESPRIT technology uses picking & arraying robots to identify rare soluble expression constructs from random libraries of 28,000 size-selected fragments of a single target gene. The resulting purifiable proteins can be used in structural biology and for immunisation studies.

Screening for Chemical Tools: Considerations on Compound Screening Collections, Assay Development and High-throughput Screening

Thursday, 31 May 2012 at 15:45

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In marker-based assays, the expression level of a molecular marker reports a particular biological event. This approach allows to target biological pathways and perform compound screenings in model systems to identify compounds that interfere with specific developmental processes.

Insights in shRNA Processing and siRNA Mode of Action Using Next Generation Sequencing

Wednesday, 30 May 2012 at 16:30

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This talk will discuss a new application of NGS in proving the mode of action and relative activity of RNAi therapeutics. Opportunities in companion diagnostic development will be presented alongside novel data on the processsivity and precision of key enzymes involved in RNAi.

Drinks Reception

Wednesday, 30 May 2012 at 17:00

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Session: Application of Sequencing Data

Thursday, 31 May 2012 at 08:55

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Lunch and Networking in Exhibition Hall

Thursday, 31 May 2012 at 12:30

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Coffee Break and Networking in Exhibition Hall

Thursday, 31 May 2012 at 15:15

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Close of Conference

Thursday, 31 May 2012 at 15:45

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Poster Viewing Session

Thursday, 31 May 2012 at 13:30

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Session: Cord Blood Banking: Approaches for QA, QC and Storage

Wednesday, 30 May 2012 at 08:55

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Session: Banking of Various Biological Samples: Ethical and Privacy Considerations

Wednesday, 30 May 2012 at 09:55

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Poster Viewing Session

Wednesday, 30 May 2012 at 13:30

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Careful Selection of the Proper Tools to Increase Productivity of Biobanks

Thursday, 31 May 2012 at 14:45

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To illustrate the selection of tools in building a bioprocessing workflow. These turn-key systems allow for increases in throughput, decreased costs per samples and an increase in the consistency and quality of the samples delivered to both the downstream customer and to the Biobank for storage.

Data Integrated Liquid Handling and Direct Dilution Strategies

Wednesday, 30 May 2012 at 10:00

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Effect of Liquid Handling QC on Biological Assay Performance

Wednesday, 30 May 2012 at 11:45

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This presentation will examine liquid handling quality control (QC) tools and how an only slightly improperly calibrated liquid handler can affect the performance of a model biological assay with quite drastic effects.

µL and nL Liquid Handling, From the Bench to the Deck

Wednesday, 30 May 2012 at 14:15

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Quick implementation of automated liquid handlers: how to dispense accurately and timely in the nL and µL ranges. Examples from the Enzymology and Biophysical Assay group in Novartis/NIBR/ONC Basel.

Enabling Compound Management Capabilities and Workflows through Automation

Wednesday, 30 May 2012 at 16:00

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In my presentation, I will discuss the evolution of our automation from standalone instruments to integrated systems and the importance of synergies between hardware and software systems. Specifically, I hope to illustrate how automation in compound management workflows has allowed NIBR-Emeryville Compound Management to drive organizational improvements in productivity and quality of actionable data.

High Content Screening and Microscopy in Research and Drug Discovery

Wednesday, 30 May 2012 at 16:30

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The presentation will focus on cell culture assays, illustrating data generated from research projects involving popular methods in cell biology such as siRNA, G-Protein receptor analysis and stem cell research.

A New Multiplex Microarray Platform with Compact DNA Sequencing Technology as a Novel Tool for Routine Diagnostic Use

Thursday, 31 May 2012 at 11:45

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Coffee Break and Networking in the Exhibition Hall

Wednesday, 30 May 2012 at 10:30

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Lunch and Networking in the Exhibition Hall

Wednesday, 30 May 2012 at 12:30

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Poster Viewing Session

Wednesday, 30 May 2012 at 13:30

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Coffee Break and Networking in the Exhibition Hall

Wednesday, 30 May 2012 at 15:15

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Drinks Reception

Wednesday, 30 May 2012 at 17:00

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Coffee Break and Networking in the Exhibition Hall

Thursday, 31 May 2012 at 10:30

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Analysis of Complex Biological Samples: A Challenge for Separation Science, Mass Spectrometry and Bioinformatics

Thursday, 31 May 2012 at 09:00

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Samples derived from biological systems are extremely complex and it is often unclear how many compounds a given sample contains. Comprehensive analysis of complex biological samples requires a combination of sample preparation, separation and mass spectrometry with dedicated data analysis.

Microscopic Description of Transfer Phenomena in Chromatography

Wednesday, 30 May 2012 at 11:15

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The microscopic theory of chromatography describes the evolution of a chromatographic peak as the random migration of the molecules along the column combined with adsorption–desorption processes that occur at random, too. The molecular dynamic model is rather straightforward to comprehend and it can furnish direct answers when one tries to understand the development of chromatographic peaks. 

Multi-analyte Procedures for Target Screening and Quantification of Drugs in Blood using LC-MS/MS: Possibilities and Limitations

Thursday, 31 May 2012 at 11:15

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The pros and cons will be presented of multi-analyte LC-MS/MS approaches for target screening and quantification in plasma of over 100 drugs of various classes, including suitable workup, sufficient separation, ion suppression and enhancement testing, full validation and one-point calibration.

Probing Plants and Surfaces by Ambient Mass Spectrometry: Overview and Recent Applications

Thursday, 31 May 2012 at 09:30

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After briefly introducing ambient MS, some new exciting developments are highlighted. Several DART-MS and DESI-MS applications from the author’s group related to natural products chemistry and modified organic surfaces are presented.

In-line LCxLC Hyphenation by Machine Vision Controlled Solvent Evaporation

Thursday, 31 May 2012 at 10:00

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We developed a machine vision controlled solvent evaporation interface and droplet sample transfer device to increase the separation capacity and analyte detectability for multidimensional liquid chromatography systems to aid complex sample analysis.

Novel Developments in Separation Modeling Technology

Wednesday, 30 May 2012 at 14:45

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QbD and Design Space are new terms for HPLC user. Continual improvement and the establishment of robust methods based on solid science can only be achieved in a short time if modeling technologies are applied.

Nano-Agglomerated Stationary Phases for Solid Phase Extraction

Wednesday, 30 May 2012 at 14:15

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The preparation and application of silica monoliths with a dense surface coating of nanoparticles (iron oxide or gold) for enrichment of phosphopeptides or glycoproteins respectively shall be discussed. Furthermore, the preparation of continuous gold films upon capillaries or stationary phases will also be shown.

Plastic Antibodies: A Promising Tool for the Purification and Detection of Biomolecules

Wednesday, 30 May 2012 at 16:00

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The talk will describe our efforts to develop molecularly imprinted polymers (MIPs), in soluble form termed "plastic antibodies", for use as capture agents in peptide, protein or lipid analysis. I will emphasize the added value of these receptors over their biological counterparts such as the recognition of peptidic biomarkers under nonphysiological conditions e.g. acetonitrile-buffer mixtures or in denaturing media.

Microfluidic Systems for the Analysis of Mass-limited Samples

Thursday, 31 May 2012 at 11:45

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Microfluidic technology allows accurate handling of liquid volumes in the nl to µl range, in miniaturized systems with integrated in-situ monitoring elements. This development is especially relevant for the Life Sciences, but also offers opportunities for process analytical technology. Several device examples will be discussed, including HPLC on a chip and microfluidic NMR and IR probes.

Automated Liquid Handling in Forensic Genetics

Wednesday, 30 May 2012 at 09:00

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Automation is being increasingly used also in the world of forensics. The talk will focus on the implications of utilizing automation in forensic environments as well as including examples of workflows of realized solutions.

Developing and Executing on a Lab Informatics Foundation for Global Growth

Thursday, 31 May 2012 at 09:00

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We will explore the process of developing a lab informatics platform for a growing, global, multi-site organization while managing acquisitions and collaborations and harmonizing processes.

Interoperable Digital Identities and Signatures: Fundamental to Research Collaboration in the Cloud

Thursday, 31 May 2012 at 10:00

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Interoperable digital identities, digital signatures and cloud computing are used successfully to accelerate initiation of a clinical trial while lowering its costs.

From Smart Tea to Blog3: A story of Users, Laboratories and the Semantic Web

Thursday, 31 May 2012 at 14:45

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That electronic and digital notebook systems are the way forward for scientific research is widely agreed, however there is no consensus on what form these will take.  We explore the role of the semantic web and web 2.0 in bringing the research notes into the 21st century.

Data Integrated Liquid Handling and Direct Dilution Strategies

Wednesday, 30 May 2012 at 09:30

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The presentation will discuss the strategies of Titian’s Mosaic software, from integration with standalone instruments to integrated systems such as the Labcyte POD and stores, including the pros and cons of various approaches.

ACCESS: An Academic Chemical Screening Platform for Switzerland

Wednesday, 30 May 2012 at 16:00

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The BSF at the EPFL is currently being developed to become a country-wide platform hosting the Swiss chemical collection with up to 200’000 compounds. Infrastructure implementations, procedures and the global strategy for compound acquisition, management and analytical characterization will be described.

Coffee Break and Networking in Exhibition Hall

Wednesday, 30 May 2012 at 10:30

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Lunch Break and Networking in Exhibition Hall

Wednesday, 30 May 2012 at 12:15

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Poster Viewing Session

Wednesday, 30 May 2012 at 13:30

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LIMS and ELN

Thursday, 31 May 2012 at 11:10

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Coffee Break and Networking in Exhibition Hall

Wednesday, 30 May 2012 at 15:15

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Cloud Computing in Automation

Thursday, 31 May 2012 at 09:25

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Drinks Reception

Wednesday, 30 May 2012 at 17:00

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Improving Productivity via Robotic Liquid Handling in Regulated Bioanalysis

Wednesday, 30 May 2012 at 10:00

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Development of a fully integrated multiple-assay sample preparation suite for routine regulated bioanalytical portfolio support via the Hamilton STAR robotic liquid handling workstation.

Registration

Wednesday, 30 May 2012 at 08:00

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The Use of Acoustic Technology for Non-DMSO, Drug Discovery Application

Thursday, 31 May 2012 at 11:15

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This presentation will introduce the technology of Labcytes’ Echo-OMICS platform and some of the ways this platform is being utilized within GlaxoSmithKline. Data will be presented to demonstrate the use of this system to support non-DMSO sample handling. This will include, the dispense of antibodies for Meso-Scale Discovery (MSD) plate production within the assay development for MSD assays and by replicating data from established MSD assays at GSK. Additionally the application of this technology to reduce the volumes of biological reagents needed in crystallography studies will be discussed.

Micro Segmented Flow for Characterization of Combinatorial Effects in Toxicology

Thursday, 31 May 2012 at 15:45

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The step-wise variation of concentrations and the addressing of two- and higher-dimensional concentration spaces by droplet-based microfluidics are applied for the determination of dose/response functions and combinatorial effects of toxins on microorganisms.

Enabling Technologies

Thursday, 31 May 2012 at 09:25

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Registration

Wednesday, 30 May 2012 at 08:00

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Workflow Automation

Wednesday, 30 May 2012 at 09:55

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Molecular Isolation on the Nanoscale

Wednesday, 30 May 2012 at 10:00

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The detection of toxins and pathogens has been an increasingly vital concern to society. Their detection is often hampered by the minute quantities that need to be detected for early prevention and treatment to be effective. This work is aiming to utilize Surface Enhanced Raman Spectroscopy (SERS) to demonstrate single molecule sensitivity of these, from an array of gold nanoparticles (NPs) at a liquid-liquid interface. This work will be combined with reversible adsorption of these particles to such interfaces to allow the full potential of such systems to be realized: in the bulk, the NPs will have the intrinsic high surface area of nano-structures; while the localized particles will have the single molecule sensitivity of aggregates; coupled with the ability of the liquid-liquid interface to detect hydrophobic, hydrophilic and amphiphilic targets.

Phaseguides: A Paradigm Shift in Microfluidics Filling and Emptying

Thursday, 31 May 2012 at 14:15

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Phaseguide technology enables passive routing of liquids in smallest volumina. We demonstrate its potential for RNA extraction, cell sorting and enrichment and massive parallel cell and tissue culturing.

CRAM: A Framework for Sequence Data Compression

Wednesday, 30 May 2012 at 11:15

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In the talk, I will detail the needs for compression of raw NGS data and will describe the CRAM concept for serving these needs. Finally, I will outline approaches that apply compression differentially across the growing body of NGS data.

Recent Progress in Core-shell and Embedded Nanoparticle Technology for Biomarker Separation with Amperometric Sensing at a Boron Doped Diamond Electrode.

Thursday, 31 May 2012 at 14:45

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New superficially porous or core shell silica particle technology for liquid chromatography is described, which allows nanoscale control over shell thickness, and high efficiency separations. The enhancement of separation selectivity for important low molecular biomarkers using embedded gold and silica nanoparticles is illustrated using capillary electrophoresis, where the sensitivity is also enhanced using amperometric detection.

Novel Separation Techniques and Methodologies

Wednesday, 30 May 2012 at 09:25

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Protein Analysis

Wednesday, 30 May 2012 at 15:55

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Separation Science for MS

Thursday, 31 May 2012 at 08:55

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Microfluidic Separation

Thursday, 31 May 2012 at 11:40

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Polymeric Monolithic Materials and Liquid Chromatography

Wednesday, 30 May 2012 at 09:30

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This presentation will highlight some of the latest and innovative applications of polymer monolithic materials in separation science. The presentation will detail new approaches to the fabrication and modification of monolithic substrates and their further modification with structured and selective surface chemistry/biochemistry.

Magnetic Particle-based Microfluidic Systems and Nanofluidics for Analytical Applications

Wednesday, 30 May 2012 at 09:00

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We describe microfluidic systems that use magnetic manipulation of magnetic microparticles for the realization of immunoassays, and nanofluidic devices for biological sample concentration.

LIMS in Lab Automation – Connecting the Laboratory

Thursday, 31 May 2012 at 11:15

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Affordable and Effortless Low Volume Reagent Dispensing

Wednesday, 30 May 2012 at 12:15

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Increased throughput and savings in reagent cost through assay miniaturization are drivers of modern pharmaceutical and biotechnology laboratories today. The Thermo Scientific Multidrop Combi nL is a reagent dispenser designed for fast and accurate dispensing of low volumes up to 1536-well plates, helping in achieving these goals. It can be used for dispensing various solutions, such as DMSO, buffers, PCR reaction mix, sequencing reagents, and even cells. Multidrop Combi nL offers flexible features at an affordable price. Due to individually controlled valves, it can dispense into any well with any volume, allowing dispensing of samples into selected wells. As a small sized instrument it easily fits into automation platforms for increased throughput. Small dead volume and accurate low volumes down to 50 nl, combined with extreme ease of use, offer reagent savings and cost effectiveness. The Multidrop Combi nL reagent dispenser is an efficient tool for pharmaceutical and biotechnology laboratories for reproducible and reliable assay results.

Managing a Collection of Stereochemically Diverse Libraries

Wednesday, 30 May 2012 at 09:30

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Next-generation DNA Sequencing Techniques and Applications

Thursday, 31 May 2012 at 11:45

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Next generation DNA sequencing techniques are opening fascinating opportunities in life sciences. Commercially available  DNA sequencing platforms, Single molecule Real-time methods, Nanopores (also Graphene), as well as other techniques under development are described and applications in bio-medical fields discussed.Next generation DNA sequencing techniques are opening fascinating opportunities in life sciences. Commercially available  DNA sequencing platforms, Single molecule Real-time methods, Nanopores (also Graphene), as well as other techniques under development are described and applications in bio-medical fields discussed.

New Approaches to Solving Old Problems in High Content Imaging of Cells in vitro

Thursday, 31 May 2012 at 09:30

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To address many of the issues surrounding the use of cell based assay systems in High Content Imaging, we have developed a novel Micro-Plate Bioreactor Array and 3D assay technologies. In this presentation we will examine the tangible benefits of these technologies and how these new assay tools may be routinely incorporated into automated HCS/A workflows.

High Content Cell Based Assays in Drug Discovery: Changing the HTS Paradigm

Wednesday, 30 May 2012 at 09:00

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HCS has evolved over the course of nearly two decades, enabling us to perform highly complex cellular based HCA screens; with it came data explosion requiring special logistics. I will present examples and discuss resolutions to HCS data acquisition and management.

Can Informatics Enhance API Route Design Procedures?

Wednesday, 30 May 2012 at 11:45

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The presentation will describe work around a pilot study to explore the use of Isentris Reaction Planner as a tool for synthetic route design of pharmaceutical APIs.  

New Possibilities of Process Modelling Languages for Workflow Automation in Laboratories

Wednesday, 30 May 2012 at 10:00

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Is the new standard Business Process Model and Notation (BPMN) ready to use? How to apply Business Process Management Systems (BPMS) for heterogeneous systems integration? Is BPMN 2.0 a key for more efficiency and better quality assurance?

Utilizing Nanoliter Dispensing as a Solution for Rapid Mechanistic Profiling of Enzyme Inhibitors

Wednesday, 30 May 2012 at 14:45

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A common bottle neck incurred when profiling inhibitors is the laborious pipetting stages that are normally associated in carrying out such experiments. This presentation describes how the utilization of nanolitre dispensing has provided a solution in speeding up the process of profiling these inhibitors.

Optimising Efficiency in a High-throughput Service Lab – Automation Solutions

Wednesday, 30 May 2012 at 12:15

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Running a high-throughput genotyping and nucleic acid preparation service laboratory provides our instrumentation development team with a unique insight to the challenges faced by our customers in their own operations. The development of the LGC Genomics/KBioscience range of laboratory instrumentation has always been driven by innovations required to improve efficiency in our own laboratories and the presentation at this year’s ELA focuses on some of the key developments we have initiated in the areas of high-throughput MTP replication, DNA extraction, assay dispensing and liquid handling and high throughput water bath thermal cycling for PCR. The presentation includes videos, animations and graphical representations of our laboratory automation solutions, their development and overviews of the workflow solutions we have developed to optimise throughput in singleplex genotyping projects and the flexibility offered through this approach to data set generation.

High Concentration Biochemical Fragment Screening on GPCRs

Wednesday, 30 May 2012 at 16:30

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The utility of high concentration biochemical fragment screening on membrane-bound drug targets less prone to biophysical detection will be presented.

NGS Sample Preparation at EMBL GeneCore

Thursday, 31 May 2012 at 12:15

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Overview about laboratory workflows and automation strategies in a NGS core facility focussing on liquid handling devices.

Biobanking Applications for Genomics

Wednesday, 30 May 2012 at 17:00

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Targeted Resequencing Applications in a High-throughput Laboratory

Thursday, 31 May 2012 at 09:30

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High-Throughput Screening for Identification of BMP Signalling Agonists

Wednesday, 30 May 2012 at 17:30

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Cell based luminescent assay has been developed for HTS identification of small molecule BMP-signaling activators, based on induction of Id-1 expression. Hit identification and follow-up strategy will be discussed.

Registration

Wednesday, 30 May 2012 at 08:00

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Close of Conference

Thursday, 31 May 2012 at 15:45

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Electric News for the Future of Plate Sealing

Wednesday, 30 May 2012 at 12:15

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Technology Spotlight - Invenios

Wednesday, 30 May 2012 at 12:15

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Compound Management Requirements to Support High Throughput Approaches to in vitro Assay Validation

Thursday, 31 May 2012 at 14:45

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The Institute for Health and Consumer Protection (IHCP) hosts the European Union Reference Laboratory for Alternative Methods to Animal Testing (EURL-ECVAM) which is active in evaluating and validating in vitro cell based assays that can be used in regulatory safety assessment of chemicals. High throughput screening approaches are being investigated to expedite the process. Effective management of reference compounds including characterisation of solubility, stability, fate and traceability, is critical to ensure quality and reliability of validation results.

Management and Automation System for Complete qPCR Diagnostics Workflow

Wednesday, 30 May 2012 at 14:45

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Complexity of qPCR (Real-Time Polymerase Chain Reaction) as one of the leading methods in the molecular diagnostics field, defines a clear demand for the simple qPCR workflow automation system that can ease the pressure on high level scientists.

Using Hudson's New "Guided Operation"(GO) Wizards to Improve Automation Performance for Small Work Cells

Thursday, 31 May 2012 at 12:15

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The GO wizards are a new feature in SoftLinx, Hudson's powerful scheduling software.  The wizard is created to take a user step by step through a complex protocol involving set up and running of liquid handling steps as well as all benchtop instruments required for the protocol including those requiring a "sneaker net" interface.

Miniaturization in Biobanking

Thursday, 31 May 2012 at 12:15

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As assay technologies advance, aliquot size required for analysis is decreasing. Typical proteomic MS biomarker assays require sample volumes of less than 50µl while biobanks typically store much larger volumes. Sample miniaturization presents opportunities to increase aliquot numbers (and allow for greater sample utilization without the need for additional freeze/thaw cycles) while presenting opportunities to maximize storage capacity and minimize the costs of long term cryostorage of biospecimens by reducing the overall size of biobank collections. This presentation will address comparisons between smaller and larger storage volumes, tube and sealing technologies, calculations for store sizes and total energy consumption and related topics.

Next-generation DNA Sequencing Techniques and Applications

Thursday, 31 May 2012 at 11:45

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Next generation DNA sequencing techniques are opening fascinating opportunities in life sciences. Commercially available  DNA sequencing platforms, Single molecule Real-time methods, Nanopores (also Graphene), as well as other techniques under development are described and applications in bio-medical fields discussed.

A Global Automation Strategy in Drug Metabolism & Pharmacokinetics for PK and PK/PD Sample Preparation

Thursday, 31 May 2012 at 15:45

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Significant improvement in throughput/capacity and at the same time free up time resources for the bioanalyst in discovery bioanalysis with LC-MS/MS has been accomplished by automating many individual bioanalytical tasks such as method development, sample preparation and sample analysis.

Wednesday, 30 May 2012 at 07:00

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Wednesday, 30 May 2012 at 07:00

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Management and Automation System for Complete qPCR Diagnostics Workflow

Wednesday, 30 May 2012 at 14:45

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Complexity of qPCR (Real-Time Polymerase Chain Reaction) as one of the leading methods in the molecular diagnostics field, defines a clear demand for the simple qPCR workflow automation system that can ease the pressure on high level scientists.

Traceable Automated UV/Vis Quantification of Microliter DNA Samples

Wednesday, 30 May 2012 at 16:30

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For high throughput UV/vis spectrophometric droplet characterization, use of a predefined sample definition table for sample tracking is compared to post measurement merging of sample definition and results.

Leveraging Image Analysis for use in Online Quantification of Drugs in Dried Sample Spots

Wednesday, 30 May 2012 at 16:00

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The complete automation of sample preparation and analysis for dried blood spots (DBS) has ignited new interest in this form of biosampling. This talk illustrates how reproducibility and data integrity features were realized by virtue of digital imaging in Prolab's SCAP DBS System.

Coffee Break and Networking in Exhibition Hall

Thursday, 31 May 2012 at 15:15

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