David Chen,
Senior High Performance Computing Specialist,
Northwestern University
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Bowtie, BWA, SHRiMP, SOAP or BLAST: Which One to Use?
Tuesday, 26 April 2011 at 17:00
Add to Calendar ▼2011-04-26 17:00:002011-04-26 18:00:00Europe/LondonBowtie, BWA, SHRiMP, SOAP or BLAST: Which One to Use?Next-Gen Sequencing Congress in BostonBostonSELECTBIOenquiries@selectbiosciences.com
Though there are some works done to evaluate popular NGS alignment methods, like Bowtie, BWA, SHRiMP and SOAP, an in-depth evaluation is needed to compare their accuracy, consistency, performance, and implementation algorithms. By our self-developed simulated datasets, we developed a quantitative model to assess the accuracy of alignments and established a guideline to help researchers select alignment software that best fits their needs.
Add to Calendar ▼2011-04-26 00:00:002011-04-27 00:00:00Europe/LondonNext-Gen Sequencing CongressNext-Gen Sequencing Congress in BostonBostonSELECTBIOenquiries@selectbiosciences.com
Add to Calendar ▼2011-04-26 17:00:002011-04-26 18:00:00Europe/LondonBowtie, BWA, SHRiMP, SOAP or BLAST: Which One to Use?Next-Gen Sequencing Congress in BostonBostonSELECTBIOenquiries@selectbiosciences.com
