Paul Fullerton,
Field Application Scientist,
Partek, Inc.
Paul T. Fullerton, Jr., Ph.D. is a Field Application Scientist at Partek, Inc. in St. Louis, MO. Paul received his B.S. in Biology from Duke University in Durham, North Carolina and his Ph.D. in Molecular and Human Genetics from Baylor College of Medicine in Houston, Texas. For his Ph.D., Paul studied the roles of TGF-beta family signaling in cancer, reproduction, and drug discovery using mouse and cell line models in the laboratory of Martin M. Matzuk, M.D., Ph.D.
Identifying Minor Cell Populations from Single-Cell Nucleus RNA-Seq Data with Partek Flow Software
Thursday, 5 October 2017 at 13:30
Add to Calendar ▼2017-10-05 13:30:002017-10-05 14:30:00Europe/LondonIdentifying Minor Cell Populations from Single-Cell Nucleus RNA-Seq Data with Partek Flow SoftwareRNA-Seq, Single Cell Analysis and Single Molecule Analysis 2017 in Coronado Island, CaliforniaCoronado Island, CaliforniaSELECTBIOenquiries@selectbiosciences.com
Single-cell RNA sequencing (scRNA-Seq) shows enormous promise to expand our understanding of heterogeneous tissues and complex diseases. A major bottleneck in scRNA-Seq experiments is bioinformatic analysis of data sets with thousands of cells. This session demonstrates scRNA-Seq analysis in Partek Flow, a robust Next-Generation Sequencing data analysis platform with an interactive graphical user interface that does not sacrifice power, speed, or flexibility when compared with command-line tools. In this session, we analyze a recently published data set that classified cell types in the mouse brain using single-cell nucleus RNA sequencing from frozen mouse brain tissue (Habib et al., Massively parallel single-nucleus RNA-seq with DroNc-seq, Nature Methods, 2017). We extend the analysis performed in the manuscript, using Partek Flow tools, such as t-SNE and K-means clustering, to focus on minor cell populations.
Add to Calendar ▼2017-10-05 00:00:002017-10-06 00:00:00Europe/LondonRNA-Seq, Single Cell Analysis and Single Molecule Analysis 2017RNA-Seq, Single Cell Analysis and Single Molecule Analysis 2017 in Coronado Island, CaliforniaCoronado Island, CaliforniaSELECTBIOenquiries@selectbiosciences.com
Add to Calendar ▼2017-10-05 13:30:002017-10-05 14:30:00Europe/LondonIdentifying Minor Cell Populations from Single-Cell Nucleus RNA-Seq Data with Partek Flow SoftwareRNA-Seq, Single Cell Analysis and Single Molecule Analysis 2017 in Coronado Island, CaliforniaCoronado Island, CaliforniaSELECTBIOenquiries@selectbiosciences.com
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